European Reference Genome Atlas (ERGA): Biodiversity Genomics Europe (BGE)
The European Reference Genome Atlas (ERGA) is a pan-European initiative with the goal of coordinating the generation of high-quality annotated reference genomes for all eukaryotic biodiversity across the Biogeographic and Marine Regions of Europe. ERGA, as the European node of the Earth BioGenome Project (EBP), aims to scale up the production of genome assemblies and annotations that meet the EBP quality standards. This includes ensuring that the data generated by ERGA Core Projects and ERGA Affiliated Projects are made publicly available and adhere to the FAIR (Findable, Accessible, Interoperable, and Reusable) and CARE (Collective benefit, Authority to control, Responsibility, and Ethics) principles.
Ensembl is a partner in the ERGA-BGE project, and we annotate the protein-coding and non-coding RNA gene structures using re-engineered versions of our Gene Annotation System (Aken et al, 2017) optimized for vertebrates and for non-vertebrates. When a species lacks transcriptomic data, we run BRAKER2 to generate hint-guided ab initio gene predictions of protein-coding genes in the default protein mode (see the blog post for more information). After QC, genomes and annotations are made available via our FTP site (see table below) before subsequently being made available in the Ensembl Genome Browser.
The Biodiversity Genomics Europe project is funded by Horizon Europe under the Biodiversity, Circular Economy and Environment (REA.B.3); co-funded by the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract number 22.00173; and by the UK Research and Innovation (UKRI) under the Department for Business, Energy and Industrial Strategy’s Horizon Europe Guarantee Scheme.
| Image | Species | Accession | Annotation method | Annotation | Proteins | Transcripts | Softmasked genome | Repeat library | Other data | View in browser | BUSCO completeness | BUSCO lineage | Alternate haplotype |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Acomys minous | GCA_964271855.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:97.7%[S:96.7%,D:1.0%],F:0.5%,M:1.8%,n:13798 | glires_odb10 | – |
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Acomys minous | GCA_964271855.1 | Import | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:54.5%[S:53.8%,D:0.7%],F:1.3%,M:44.2%,n:13798 | glires_odb10 | – |
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Actinia mediterranea | GCA_965224875.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:95.6%[S:94.8%,D:0.8%],F:1.7%,M:2.7%,n:3203 | cnidaria_odb12 | – |
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Actinia mediterranea | GCA_965224875.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:95.6%[S:94.8%,D:0.8%],F:1.7%,M:2.7%,n:3203 | cnidaria_odb12 | – |
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Ailoscolex lacteospumosus | GCA_965183755.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:95.2%[S:91.7%,D:3.6%],F:3.6%,M:1.2%,n:672 | metazoa_odb12 | – |
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Albinaria teres | GCA_964271275.2 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:82.4%[S:69.9%,D:12.5%],F:8.9%,M:8.7%,n:4421 | mollusca_odb12 | – |
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Amilenus aurantiacus | GCA_965233935.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:92.6%[S:91.8%,D:0.8%],F:3.0%,M:4.4%,n:1123 | arachnida_odb12 | – |
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Androsace saussurei | GCA_964267185.3 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:87.3%[S:64.9%,D:22.4%],F:7.2%,M:5.5%,n:2805 | eudicotyledons_odb12 | – |
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Anisus vorticulus | GCA_964264155.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.0%[S:92.9%,D:1.1%],F:1.9%,M:4.1%,n:5295 | mollusca_odb10 | – |
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Anthophora rogenhoferi | GCA_977011885.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:91.9%[S:91.7%,D:0.2%],F:4.6%,M:3.5%,n:6507 | apoidea_odb12 | – |
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Aphis hillerislambersi | GCA_980628925.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:95.8%[S:94.6%,D:1.2%],F:1.9%,M:2.3%,n:3396 | hemiptera_odb12 | – |
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Apodemus agrarius | GCA_964023405.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:98.6%[S:97.6%,D:1.0%],F:0.4%,M:1.0%,n:13798 | glires_odb10 | – |
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Arca noae | GCA_964261245.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:83.9%[S:82.9%,D:1.0%],F:2.7%,M:13.4%,n:5295 | mollusca_odb10 | – |
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Arnica montana | GCA_965212395.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.2%[S:81.2%,D:13.0%],F:3.6%,M:2.2%,n:2805 | eudicotyledons_odb12 | rapid.ensembl.org |
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Arnica montana | GCA_965212255.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.0%[S:81.6%,D:12.4%],F:3.5%,M:2.5%,n:2805 | eudicotyledons_odb12 | rapid.ensembl.org |
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Avellara fistulosa | GCA_965178325.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:95.1%[S:91.6%,D:3.5%],F:2.5%,M:2.4%,n:2805 | eudicotyledons_odb12 | rapid.ensembl.org |
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Avellara fistulosa | GCA_965178305.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:95.5%[S:92.1%,D:3.5%],F:2.4%,M:2.1%,n:2805 | eudicotyledons_odb12 | rapid.ensembl.org |
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Bombus ruderatus | GCA_977009165.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:92.6%[S:92.3%,D:0.2%],F:4.7%,M:2.7%,n:6507 | apoidea_odb12 | – |
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Camponotus vagus | GCA_980279255.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:87.2%[S:86.8%,D:0.3%],F:4.5%,M:8.4%,n:7266 | formicidae_odb12 | – |
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Carabus banonii | GCA_964291765.2 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:93.9%[S:93.6%,D:0.3%],F:2.3%,M:3.8%,n:3754 | endopterygota_odb12 | – |
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Carabus staehlini | GCA_977013385.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:92.7%[S:92.1%,D:0.5%],F:2.5%,M:4.8%,n:3729 | coleoptera_odb12 | – |
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Carlina diae | GCA_965177975.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:86.7%[S:81.0%,D:5.7%],F:8.7%,M:4.6%,n:2805 | eudicotyledons_odb12 | – |
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Cataglyphis aphrodite | GCA_977009155.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:89.8%[S:89.7%,D:0.1%],F:4.1%,M:6.1%,n:7266 | formicidae_odb12 | – |
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Catocala nymphagoga | GCA_977072295.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:90.9%[S:90.2%,D:0.7%],F:5.4%,M:3.7%,n:5760 | lepidoptera_odb12 | – |
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Ceratina cypriaca | GCA_977000435.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:93.1%[S:92.1%,D:1.0%],F:3.4%,M:3.5%,n:6507 | apoidea_odb12 | – |
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Chaetopelma lymberakisi | GCA_964291345.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:68.9%[S:66.6%,D:2.4%],F:5.3%,M:25.8%,n:3974 | araneae_odb12 | – |
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Charissa subtaurica | GCA_978018225.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:97.0%[S:96.3%,D:0.6%],F:1.9%,M:1.1%,n:5760 | lepidoptera_odb12 | – |
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Cheirolophus tagananensis | GCA_964300405.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:91.3%[S:88.0%,D:3.3%],F:4.2%,M:4.5%,n:425 | viridiplantae_odb10 | rapid.ensembl.org |
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Cheirolophus tagananensis | GCA_964300385.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:92.6%[S:87.8%,D:4.8%],F:3.2%,M:4.1%,n:2805 | eudicotyledons_odb12 | rapid.ensembl.org |
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Cistus crispus | GCA_965213365.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:91.4%[S:84.6%,D:6.8%],F:3.4%,M:5.3%,n:2805 | eudicotyledons_odb12 | – |
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Coenonympha oedippus | GCA_964304575.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:93.1%[S:92.1%,D:1.0%],F:2.0%,M:4.9%,n:5286 | lepidoptera_odb10 | – |
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Colletes cyprius | GCA_977880175.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:93.9%[S:93.6%,D:0.3%],F:3.5%,M:2.6%,n:6507 | apoidea_odb12 | rapid.ensembl.org |
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Colletes cyprius | GCA_977880195.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:93.9%[S:93.6%,D:0.3%],F:3.6%,M:2.6%,n:6507 | apoidea_odb12 | rapid.ensembl.org |
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Cricetus cricetus | GCA_964304595.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:97.9%[S:96.8%,D:1.1%],F:0.5%,M:1.6%,n:13798 | glires_odb10 | – |
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Crocidura zimmermanni | GCA_965212715.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:90.4%[S:88.8%,D:1.6%],F:1.6%,M:8.0%,n:12234 | laurasiatheria_odb10 | – |
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Crocidura zimmermanni | GCA_965212715.1 | Import | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:61.8%[S:60.5%,D:1.3%],F:1.9%,M:36.3%,n:12234 | laurasiatheria_odb10 | – |
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Crocidura zimmermanni | GCA_965212715.1 | Import | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:61.8%[S:60.5%,D:1.3%],F:1.9%,M:36.3%,n:12234 | laurasiatheria_odb10 | – |
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Culex laticinctus | GCA_964187845.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:95.5%[S:94.2%,D:1.3%],F:1.4%,M:3.1%,n:3285 | diptera_odb10 | – |
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Culex modestus | GCA_964213205.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.1%[S:89.9%,D:4.2%],F:1.4%,M:4.5%,n:3285 | diptera_odb10 | – |
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Culex perexiguus | GCA_964243045.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.2%[S:91.2%,D:3.0%],F:1.7%,M:4.1%,n:3285 | diptera_odb10 | – |
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Culex theileri | GCA_964340515.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.6%[S:92.2%,D:2.4%],F:1.7%,M:3.7%,n:3285 | diptera_odb10 | – |
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Cymodocea nodosa | GCA_964274905.3 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:75.5%[S:72.2%,D:3.3%],F:11.3%,M:13.2%,n:2821 | liliopsida_odb12 | – |
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Dactylopius coccus | GCA_977009245.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:91.4%[S:89.7%,D:1.7%],F:2.8%,M:5.8%,n:3396 | hemiptera_odb12 | – |
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Dailognatha quadricollis | GCA_965183915.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.9%[S:93.8%,D:1.0%],F:1.8%,M:3.4%,n:3754 | endopterygota_odb12 | – |
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Dendarus foraminosus | GCA_965152765.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:96.1%[S:94.6%,D:1.5%],F:1.2%,M:2.7%,n:2124 | endopterygota_odb10 | – |
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Deroceras lasithionense | GCA_964271515.3 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:77.2%[S:68.2%,D:9.0%],F:10.6%,M:12.2%,n:4421 | mollusca_odb12 | – |
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Diadema setosum | GCF_964275005.1 | Import | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:98.5%[S:98.0%,D:0.5%],F:0.3%,M:1.2%,n:954 | metazoa_odb10 | – |
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Earias vernana | GCA_978021555.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.9%[S:96.2%,D:0.7%],F:1.8%,M:1.3%,n:5760 | lepidoptera_odb12 | – |
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Erebia palarica | GCA_964035005.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.2%[S:93.3%,D:0.9%],F:1.7%,M:4.1%,n:5286 | lepidoptera_odb10 | – |
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Eucera mavromoustakisi | GCA_977019085.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:93.2%[S:93.0%,D:0.2%],F:3.9%,M:2.9%,n:6507 | apoidea_odb12 | – |
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Eunicella cavolini | GCA_965177985.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:92.3%[S:91.4%,D:0.9%],F:4.5%,M:3.2%,n:3203 | cnidaria_odb12 | – |
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Fannia canicularis | GCA_977012895.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:95.8%[S:94.3%,D:1.5%],F:1.5%,M:2.7%,n:5912 | brachycera_odb12 | – |
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Formica gagates | GCA_976983035.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:90.4%[S:90.0%,D:0.3%],F:3.7%,M:5.9%,n:7266 | formicidae_odb12 | – |
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Gambusia holbrooki | GCA_965282415.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:91.2%[S:90.9%,D:0.3%],F:2.2%,M:6.6%,n:14582 | cyprinodontiformes_odb12 | rapid.ensembl.org |
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Gambusia holbrooki | GCA_965282465.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:91.0%[S:90.5%,D:0.4%],F:2.2%,M:6.8%,n:14582 | cyprinodontiformes_odb12 | rapid.ensembl.org |
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Glaucopsyche paphos | GCA_974871385.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.4%[S:94.8%,D:0.6%],F:2.1%,M:2.5%,n:6917 | papilionoidea_odb12 | – |
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Gluvia dorsalis | GCA_964187665.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:94.8%[S:92.7%,D:2.1%],F:1.6%,M:3.6%,n:2934 | arachnida_odb10 | – |
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Gluvia dorsalis | GCA_964187665.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:90.7%[S:89.2%,D:1.4%],F:4.2%,M:5.2%,n:1123 | arachnida_odb12 | – |
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Graellsia isabellae | GCA_964265105.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:93.6%[S:92.9%,D:0.7%],F:1.6%,M:4.8%,n:5286 | lepidoptera_odb10 | – |
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Graphosoma italicum | GCA_965282445.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:87.3%[S:86.9%,D:0.5%],F:2.8%,M:9.9%,n:3396 | hemiptera_odb12 | rapid.ensembl.org |
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Graphosoma italicum | GCA_965282455.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:95.7%[S:95.3%,D:0.4%],F:2.9%,M:1.4%,n:3396 | hemiptera_odb12 | rapid.ensembl.org |
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Halictus nicosiae | GCA_976986675.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:92.8%[S:92.3%,D:0.5%],F:4.0%,M:3.2%,n:6507 | apoidea_odb12 | – |
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Hemorrhois hippocrepis | GCA_964340495.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:90.9%[S:88.9%,D:2.0%],F:1.6%,M:7.5%,n:7480 | sauropsida_odb10 | – |
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Hipparchia cypriensis | GCA_978046935.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:94.4%[S:94.0%,D:0.4%],F:2.5%,M:3.1%,n:6917 | papilionoidea_odb12 | – |
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Hipparchia maderensis | GCA_966190265.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:96.7%[S:96.4%,D:0.4%],F:1.8%,M:1.5%,n:5760 | lepidoptera_odb12 | rapid.ensembl.org |
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Hipparchia maderensis | GCA_976063885.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:94.2%[S:93.7%,D:0.5%],F:2.6%,M:3.2%,n:6917 | papilionoidea_odb12 | rapid.ensembl.org |
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Hirudo verbana | GCA_965178055.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:92.4%[S:88.5%,D:3.9%],F:3.9%,M:3.7%,n:672 | metazoa_odb12 | – |
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Hirudo verbana | GCA_965178055.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:92.4%[S:88.5%,D:3.9%],F:3.9%,M:3.7%,n:672 | metazoa_odb12 | – |
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Hirudo verbana | GCA_965178065.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:90.6%[S:87.1%,D:3.6%],F:5.2%,M:4.2%,n:672 | metazoa_odb12 | – |
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Hirudo verbana | GCA_965178065.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | Repeatmodeler | FTP dumps | www.ensembl.org | C:90.6%[S:87.1%,D:3.6%],F:5.2%,M:4.2%,n:672 | metazoa_odb12 | – |
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Homalothecium mandonii | GCA_981437985.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:75.0%[S:68.1%,D:6.9%],F:8.6%,M:16.4%,n:2026 | embryophyta_odb12 | – |
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Irwiniella nobilipennis | GCA_981692195.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:92.2%[S:91.0%,D:1.2%],F:2.8%,M:5.1%,n:5912 | brachycera_odb12 | – |
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Larinus ursus | GCA_979861375.2 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:94.6%[S:93.7%,D:0.9%],F:3.2%,M:2.2%,n:4010 | polyphaga_odb12 | – |
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Leiobunum subalpinum | GCA_965184155.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:94.4%[S:93.4%,D:1.0%],F:2.6%,M:3.0%,n:1123 | arachnida_odb12 | – |
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Leiobunum subalpinum | GCA_965184155.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:92.6%[S:91.9%,D:0.7%],F:2.5%,M:4.9%,n:1123 | arachnida_odb12 | – |
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Lepus castroviejoi | GCA_978442995.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:95.5%[S:93.3%,D:2.1%],F:1.7%,M:2.8%,n:12556 | glires_odb12 | – |
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Leviellus thorelli | GCA_965183905.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:90.0%[S:89.2%,D:0.8%],F:3.0%,M:7.0%,n:3974 | araneae_odb12 | – |
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Lineus lacteus | GCA_965152395.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.0%[S:95.8%,D:0.1%],F:2.5%,M:1.5%,n:672 | metazoa_odb12 | – |
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Lineus lacteus | GCA_965152395.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.0%[S:95.8%,D:0.1%],F:2.5%,M:1.5%,n:672 | metazoa_odb12 | – |
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Macrothele cretica | GCA_964417605.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:69.6%[S:66.9%,D:2.7%],F:5.4%,M:25.0%,n:3974 | araneae_odb12 | – |
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Malpolon monspessulanus | GCA_964265115.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:88.4%[S:87.0%,D:1.4%],F:2.2%,M:9.4%,n:7480 | sauropsida_odb10 | – |
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Malpolon monspessulanus | GCA_964265115.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:93.6%[S:92.2%,D:1.4%],F:0.9%,M:5.5%,n:7480 | sauropsida_odb10 | – |
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Maniola cypricola | GCA_981601725.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:92.2%[S:90.7%,D:1.5%],F:3.1%,M:4.7%,n:6917 | papilionoidea_odb12 | – |
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Marifugia cavatica | GCA_964291435.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:92.7%[S:86.4%,D:6.3%],F:3.9%,M:3.4%,n:954 | metazoa_odb10 | – |
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Martes foina | GCA_964304585.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.3%[S:94.5%,D:0.8%],F:0.9%,M:3.8%,n:14502 | carnivora_odb10 | – |
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Marumba quercus | GCA_978045685.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.2%[S:94.9%,D:0.3%],F:2.8%,M:1.9%,n:5760 | lepidoptera_odb12 | rapid.ensembl.org |
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Marumba quercus | GCA_978018465.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.3%[S:95.0%,D:0.3%],F:2.8%,M:1.9%,n:5760 | lepidoptera_odb12 | rapid.ensembl.org |
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Megachile posti | GCA_976976495.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:94.4%[S:94.1%,D:0.3%],F:3.5%,M:2.1%,n:6507 | apoidea_odb12 | – |
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Messor bucephalus | GCA_977014345.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:87.5%[S:87.2%,D:0.2%],F:4.9%,M:7.6%,n:7266 | formicidae_odb12 | – |
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Messor oertzeni | GCA_978158835.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:91.1%[S:90.7%,D:0.3%],F:3.9%,M:5.1%,n:7266 | formicidae_odb12 | – |
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Messor oertzeni | GCA_973577575.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:91.1%[S:90.8%,D:0.3%],F:3.9%,M:5.0%,n:7266 | formicidae_odb12 | – |
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Messor orientalis | GCA_978018205.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:87.5%[S:87.1%,D:0.4%],F:4.9%,M:7.7%,n:7266 | formicidae_odb12 | – |
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Muscula muscula | GCA_981596825.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:96.2%[S:95.4%,D:0.8%],F:2.5%,M:1.3%,n:5760 | lepidoptera_odb12 | – |
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Mylabris quadripunctata | GCA_977015545.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:94.9%[S:94.5%,D:0.4%],F:1.5%,M:3.6%,n:4010 | polyphaga_odb12 | – |
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Natrix maura | GCA_964659585.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:93.2%[S:91.4%,D:1.8%],F:1.2%,M:5.6%,n:7480 | sauropsida_odb10 | – |
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Nychiodes aphrodite | GCA_979853865.1 | Ensembl Genebuild | GTF, GFF3 | – | – | FASTA | – | FTP dumps | Coming soon! | C:96.4%[S:95.8%,D:0.6%],F:2.1%,M:1.5%,n:5760 | lepidoptera_odb12 | – |
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Patella rustica | GCA_965111895.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.9%[S:95.4%,D:0.5%],F:1.9%,M:2.2%,n:4421 | mollusca_odb12 | – |
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Phorcus turbinatus | GCA_965237135.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.4%[S:96.0%,D:0.4%],F:2.5%,M:1.1%,n:4421 | mollusca_odb12 | – |
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Phorcus turbinatus | GCA_965237135.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.4%[S:96.0%,D:0.4%],F:2.5%,M:1.1%,n:4421 | mollusca_odb12 | – |
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Phyllidia flava | GCA_964266695.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:88.9%[S:87.5%,D:1.4%],F:2.4%,M:8.7%,n:5295 | mollusca_odb10 | – |
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Pinctada radiata | GCA_964261305.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:93.2%[S:92.0%,D:1.2%],F:1.3%,M:5.5%,n:5295 | mollusca_odb10 | – |
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Pipistrellus hanaki | GCA_964339955.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:94.2%[S:93.0%,D:1.2%],F:0.9%,M:4.9%,n:12234 | laurasiatheria_odb10 | – |
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Placobdella costata | GCA_964276725.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:93.2%[S:91.7%,D:1.5%],F:3.9%,M:2.9%,n:954 | metazoa_odb10 | – |
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Prunus ramburei | GCA_965154115.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:94.5%[S:92.7%,D:1.7%],F:2.9%,M:2.6%,n:2805 | eudicotyledons_odb12 | – |
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Pseudoterpna rectistrigaria | GCA_977071175.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:97.1%[S:96.8%,D:0.3%],F:1.7%,M:1.2%,n:5760 | lepidoptera_odb12 | rapid.ensembl.org |
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Pseudoterpna rectistrigaria | GCA_977071315.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:93.5%[S:93.2%,D:0.3%],F:1.6%,M:4.9%,n:5760 | lepidoptera_odb12 | rapid.ensembl.org |
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Pyrrhula murina | GCA_965183895.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:90.9%[S:90.4%,D:0.6%],F:3.1%,M:6.0%,n:6684 | passeriformes_odb12 | – |
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Reichardia ligulata | GCA_965154505.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.8%[S:91.7%,D:5.1%],F:1.9%,M:1.2%,n:822 | viridiplantae_odb12 | rapid.ensembl.org |
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Reichardia ligulata | GCA_965154475.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.6%[S:90.8%,D:4.9%],F:1.9%,M:2.4%,n:822 | viridiplantae_odb12 | rapid.ensembl.org |
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Rupicapra rupicapra | GCA_963981305.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.6%[S:95.7%,D:0.9%],F:0.5%,M:2.9%,n:9226 | mammalia_odb10 | – |
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Staphylea pinnata | GCA_965153445.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:91.3%[S:82.4%,D:8.8%],F:4.4%,M:4.3%,n:2805 | eudicotyledons_odb12 | – |
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Stigmatoteuthis arcturi | GCA_964276865.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:79.3%[S:77.8%,D:1.5%],F:3.2%,M:17.5%,n:5295 | mollusca_odb10 | – |
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Tarphius canariensis | GCA_964277315.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.2%[S:95.1%,D:1.1%],F:0.9%,M:2.9%,n:2124 | endopterygota_odb10 | – |
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Valencia hispanica | GCA_963556495.2 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:83.4%[S:82.4%,D:1.0%],F:2.2%,M:14.4%,n:15213 | cyprinodontiformes_odb10 | – |
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Xanthium orientale | GCA_964271845.3 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.0%[S:84.7%,D:10.2%],F:2.8%,M:2.2%,n:2805 | eudicotyledons_odb12 | – |
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Xylophaga dorsalis | GCA_965225065.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.9%[S:94.4%,D:1.5%],F:2.6%,M:1.4%,n:4421 | mollusca_odb12 | – |
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Xylophaga dorsalis | GCA_965225065.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.9%[S:94.4%,D:1.5%],F:2.6%,M:1.4%,n:4421 | mollusca_odb12 | – |
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Zelkova abelicea | GCA_965283495.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:95.2%[S:93.7%,D:1.5%],F:2.2%,M:2.6%,n:2805 | eudicotyledons_odb12 | – |
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Zygaena laeta | GCA_976954175.1 | Ensembl Genebuild | GTF, GFF3 | FASTA | FASTA | FASTA | – | FTP dumps | www.ensembl.org | C:96.2%[S:95.4%,D:0.7%],F:2.1%,M:1.7%,n:5760 | lepidoptera_odb12 | – |