Darwin Tree of Life

Darwin Tree of Life Logo

The Darwin Tree of Life project (DToL) aims to exploit long read technologies to sequence the genomes of all 60,000 species of eukaryotic organisms in Britain and Ireland. It is a collaboration between biodiversity, genomics and analysis partners that hopes to transform the way we do biology, conservation and biotechnology.

Darwin Tree of Life is a consortium of partners who will build and prove an end-to-end pipeline of sample collection, sequencing, genome assembly, annotation and data dissemination that can deliver this visionary project.

The consortium partners are currently calling on the community for input into which species should be prioritised for sequencing. You can offer suggestions here.

Ensembl is a partner in the Darwin Tree of Life project, and we annotate the protein-coding and non-coding RNA gene structures using re-engineered versions of our Gene Annotation System (Aken et al, 2017) optimised for vertebrates and for non-vertebrates. When a species lacks transrciptomic data, we run BRAKER2 to generate hint-guided ab initio gene predictions of protein-coding genes, in the default protein mode (see the blog post for more information). After QC, genomes and annotations are made available via our FTP site (see table below) before subsequently being made available in the Ensembl Genome Browser.

Image Species Accession Annotation method Annotation Proteins Transcripts Softmasked genome Repeat library Other data View in browser BUSCO completeness Alternate haplotype
Abrostola tripartita GCA_905340225.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Acronicta aceris GCA_910591435.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Adalia bipunctata GCA_910592335.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Agriopis aurantiaria GCA_914767915.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Agrochola circellaris GCA_914767755.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Agrochola macilenta GCA_916701695.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Amphipyra berbera GCA_910594945.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Amphipyra berbera GCA_910594945.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Amphipyra tragopoginis GCA_905220435.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ancistrocerus nigricornis GCA_916049575.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Andrena dorsata GCA_929108735.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Andrena haemorrhoa GCA_910592295.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Andrena minutula GCA_929113495.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Anoplius nigerrimus GCA_914767735.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Anthocharis cardamines GCA_905404175.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Apamea monoglypha GCA_911387795.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Aporia crataegi GCA_912999735.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Apotomis turbidana GCA_905147355.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Aquila chrysaetos chrysaetos GCA_900496995.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps ensembl.org BUSCO –
Aricia agestis GCA_905147365.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Arvicola amphibius GCA_903992535.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Arvicola amphibius GCA_903992535.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org – –
Asterias rubens GCA_902459465.3 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Atethmia centrago GCA_905333075.3 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Athalia rosae GCA_917208135.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Autographa pulchrina GCA_905475315.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Bellardia pandia GCA_916048285.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA – FTP dumps rapid.ensembl.org BUSCO –
Bembecia ichneumoniformis GCA_910589475.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Biston betularia GCA_905404145.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Biston betularia GCA_905404145.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Blastobasis adustella GCA_907269095.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Blastobasis lacticolella GCA_905147135.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Boloria selene GCA_905231865.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Bombus campestris GCA_905333015.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Bombus campestris GCA_905333015.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Bombus hortorum GCA_905332935.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Bombus hypnorum GCA_911387925.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Bombus pascuorum GCA_905332965.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Bombus pratorum GCA_930367275.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Bombus sylvestris GCA_911622165.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Bombus terrestris GCA_000214255.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA – FTP dumps rapid.ensembl.org BUSCO –
Bombus terrestris GCA_910591885.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Bombus terrestris GCA_910591885.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Bufo bufo GCA_905171765.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org – –
Campaea margaritaria GCA_912999815.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Canis lupus GCA_905319855.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Cantharis rustica GCA_911387805.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Carcina quercana GCA_910589575.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Celastrina argiolus GCA_905187575.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Cerceris rybyensis GCA_910591515.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Cheilosia vulpina GCA_916610125.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Chrysoteuchia culmella GCA_910589605.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Chrysotoxum bicinctum GCA_911387755.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Clostera curtula GCA_905475355.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Clostera curtula GCA_905475355.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Coccinella septempunctata GCA_907165205.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Colias croceus GCA_905220415.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org – rapid.ensembl.org
Coremacera marginata GCA_914767935.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Cosmia trapezina GCA_905163495.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Craniophora ligustri GCA_905163465.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Criorhina berberina GCA_917880715.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Crocallis elinguaria GCA_907269065.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Cyaniris semiargus GCA_905187585.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Cydia splendana GCA_910591565.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Deilephila porcellus GCA_905220455.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA – FTP dumps rapid.ensembl.org BUSCO –
Dolichovespula media GCA_911387685.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Dolichovespula saxonica GCA_911387935.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Dryobotodes eremita GCA_917490735.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ectemnius continuus GCA_910591665.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ectemnius lituratus GCA_910593735.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Ectemnius lituratus GCA_910593735.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Eilema depressum GCA_914767945.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Eilema sororculum GCA_914829495.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Emmelina monodactyla GCA_916618145.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Endotricha flammealis GCA_905163395.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Ennomos fuscantarius GCA_905220475.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ennomos fuscantarius GCA_905220475.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Ennomos quercinarius GCA_910589525.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Erannis defoliaria GCA_905404285.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Erebia ligea GCA_917051295.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Eristalis arbustorum GCA_916610145.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Eristalis pertinax GCA_907269125.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Eristalis tenax GCA_905231855.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Eristalis tenax GCA_905231855.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Erynnis tages GCA_905147235.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Eulithis prunata GCA_918843925.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Eupeodes latifasciatus GCA_920104205.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Euproctis similis GCA_905147225.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Euproctis similis GCA_905147225.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Eupsilia transversa GCA_914767815.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Fabriciana adippe GCA_905404265.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Furcula furcula GCA_911728495.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Glaucopsyche alexis GCA_905404095.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Griposia aprilina GCA_916610205.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Gymnosoma rotundatum GCA_916610165.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Gymnosoma rotundatum GCA_916610165.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Habrosyne pyritoides GCA_907165245.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Hecatera dysodea GCA_905332915.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Hecatera dysodea GCA_905332915.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Hedya salicella GCA_905404275.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Hemaris fuciformis GCA_907164795.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Hesperia comma GCA_905404135.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Hydraecia micacea GCA_914767645.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Hydriomena furcata GCA_912999785.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Hylaea fasciaria GCA_905147375.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Hypena proboscidalis GCA_905147285.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ichneumon xanthorius GCA_917499995.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Idaea aversata GCA_907269075.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Inachis io GCA_905147045.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Laothoe populi GCA_905220505.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Lasioglossum lativentre GCA_916610255.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Lasioglossum morio GCA_916610235.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Laspeyria flexula GCA_905147015.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Leptidea sinapis GCA_905404315.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Limenitis camilla GCA_905147385.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Lineus longissimus GCA_910592395.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA – FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Lycaena phlaeas GCA_905333005.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Lymantria monacha GCA_905163515.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Lysandra bellargus GCA_905333045.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Lysandra coridon GCA_905220515.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Macropis europaea GCA_916610135.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Malachius bipustulatus GCA_910589415.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mamestra brassicae GCA_905163435.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Maniola hyperantus GCA_902806685.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Maniola jurtina GCA_905333055.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Melanargia galathea GCA_920104075.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Melanostoma mellinum GCA_914767635.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Melitaea cinxia GCA_905220565.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mellicta athalia GCA_905220545.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mesoligia furuncula GCA_916614155.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mimas tiliae GCA_905332985.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mimumesa dahlbomi GCA_917499265.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Myathropa florea GCA_930367185.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mythimna ferrago GCA_910589285.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mythimna ferrago GCA_910589285.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mythimna impura GCA_905147345.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Mythimna impura GCA_905147345.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Noctua fimbriata GCA_905163415.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Noctua janthe GCA_910589295.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Noctua pronuba GCA_905220335.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Nomada fabriciana GCA_907165295.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Notocelia uddmanniana GCA_905163555.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Notodonta dromedarius GCA_905147325.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Nymphalis polychloros GCA_905220585.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Nymphalis polychloros GCA_905220585.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Nymphalis urticae GCA_905147175.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Nymphalis urticae GCA_905147175.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Nysson spinosus GCA_910591585.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ochlodes sylvanus GCA_905404295.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ochropleura plecta GCA_905475445.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ocypus olens GCA_910593695.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Omphaloscelis lunosa GCA_916610215.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Orgyia antiqua GCA_916999025.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Osmia bicornis bicornis GCA_907164935.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org – rapid.ensembl.org
Pammene fasciana GCA_911728535.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Papilio machaon GCA_912999745.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Parapoynx stratiotata GCA_910589355.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pararge aegeria GCA_905163445.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Patella pellucida GCA_917208275.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Peribatodes rhomboidaria GCA_911728515.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Phalera bucephala GCA_905147815.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pheosia gnoma GCA_905404115.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pheosia tremula GCA_905333125.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Phlogophora meticulosa GCA_905147745.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pieris brassicae GCA_905147105.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pieris napi GCA_905231885.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pieris napi GCA_905475465.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pieris napi GCA_905475465.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Pieris rapae GCA_905147795.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Platycheirus albimanus GCA_916050605.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Platycheirus albimanus GCA_916050605.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Plebejus argus GCA_905404155.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Plebejus argus GCA_905404155.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Pollenia angustigena GCA_930367215.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pterostichus madidus GCA_911728475.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pterostichus madidus GCA_911728475.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Ptilodon capucinus GCA_914767695.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pyrgus malvae GCA_911387765.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Pyrochroa serraticornis GCA_905333025.2 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Rana temporaria GCA_905171775.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org – –
Rattus norvegicus (BN/NHsdMcwi) GCA_015227675.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps ensembl.org BUSCO –
Rhagonycha fulva GCA_905340355.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Salmo trutta GCA_901001165.1 Ensembl genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps ensembl.org BUSCO –
Sarcophaga caerulescens GCA_927399465.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Sarcophaga rosellei GCA_930367235.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Scaeva pyrastri GCA_905146935.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Schrankia costaestrigalis GCA_905475405.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Sciurus carolinensis GCA_902686445.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Sciurus vulgaris GCA_902686455.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps ensembl.org BUSCO –
Sciurus vulgaris GCA_902686455.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Seladonia tumulorum GCA_913789895.3 BRAKER2 GTF, GFF3 FASTA FASTA FASTA – FTP dumps rapid.ensembl.org BUSCO –
Sesia apiformis GCA_914767545.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Sphecodes monilicornis GCA_913789915.3 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Spilarctia lutea GCA_916048165.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Spilosoma lubricipeda GCA_905220595.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Syritta pipiens GCA_905187475.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Tachina fera GCA_905220375.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Tenthredo notha GCA_914767705.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Tenthredo notha GCA_914767705.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Thecocarcelia acutangulata GCA_914767995.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Thyatira batis GCA_905147785.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Thymelicus sylvestris GCA_911387775.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Tinea semifulvella GCA_910589645.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Tinea trinotella GCA_905220615.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Trachurus trachurus GCA_905171665.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Vanessa atalanta GCA_905147765.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Vanessa atalanta GCA_905147765.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Vanessa cardui GCA_905220365.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Vespa crabro GCA_910589235.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Vespa velutina GCA_912470025.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO –
Vespula germanica GCA_905340365.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Vespula vulgaris GCA_905475345.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Volucella inanis GCA_907269105.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Volucella inflata GCA_928272305.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Xanthogramma pedissequum GCA_910595825.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Xestia xanthographa GCA_905147715.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Xestia xanthographa GCA_905147715.2 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Xylota sylvarum GCA_905220385.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Ypsolopha scabrella GCA_910592155.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Zeuzera pyrina GCA_907165235.1 BRAKER2 GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org
Zygaena filipendulae GCA_907165275.1 Ensembl Genebuild GTF, GFF3 FASTA FASTA FASTA Repeatmodeler FTP dumps rapid.ensembl.org BUSCO rapid.ensembl.org